https://github.com/bnediction/reprogramming-with-bonesis
Executable paper and data demonstrating marker reprogramming of Boolean networks with BoNesis
https://github.com/bnediction/reprogramming-with-bonesis
answer-set-programming attractors boolean-networks control minimal-trap-spaces most-permissive reprogramming
Last synced: about 2 months ago
JSON representation
Executable paper and data demonstrating marker reprogramming of Boolean networks with BoNesis
- Host: GitHub
- URL: https://github.com/bnediction/reprogramming-with-bonesis
- Owner: bnediction
- Created: 2022-07-22T09:59:23.000Z (almost 3 years ago)
- Default Branch: main
- Last Pushed: 2023-03-24T11:54:05.000Z (about 2 years ago)
- Last Synced: 2025-01-21T06:23:10.467Z (3 months ago)
- Topics: answer-set-programming, attractors, boolean-networks, control, minimal-trap-spaces, most-permissive, reprogramming
- Language: TeX
- Homepage: https://nbviewer.org/github/bnediction/reprogramming-with-bonesis/blob/release/paper.ipynb
- Size: 657 KB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# Marker and source-marker reprogramming of Most Permissive Boolean networks and ensembles with BoNesis
Executable paper and data demonstrating marker reprogramming with
[BoNesis](https://github.com/bnediction/bonesis).
[:notebook: View the paper](https://nbviewer.org/github/bnediction/reprogramming-with-bonesis/blob/release/paper.ipynb)
[:arrow_forward: Execute the paper](https://mybinder.org/v2/gh/bnediction/reprogramming-with-bonesis/release?urlpath=tree/paper.ipynb) (using mybinder service)