https://github.com/bowang-lab/scGPT
https://github.com/bowang-lab/scGPT
foundation-model gpt single-cell
Last synced: about 1 year ago
JSON representation
- Host: GitHub
- URL: https://github.com/bowang-lab/scGPT
- Owner: bowang-lab
- License: mit
- Created: 2023-04-23T21:15:27.000Z (about 3 years ago)
- Default Branch: main
- Last Pushed: 2024-04-24T16:16:09.000Z (about 2 years ago)
- Last Synced: 2024-04-24T19:06:53.295Z (about 2 years ago)
- Topics: foundation-model, gpt, single-cell
- Language: Jupyter Notebook
- Homepage: https://scgpt.readthedocs.io/en/latest/
- Size: 21.9 MB
- Stars: 828
- Watchers: 37
- Forks: 146
- Open Issues: 58
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Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
- awesome-single-cell - scGPT - [Python] a single-cell large model training on 33 million human single-cell transcriptomics, supporting single-cell annotation, batch integration, perturbation prediction manuscript open access: [scGPT: toward building a foundation model for single-cell multi-omics using generative AI](https://www.nature.com/articles/s41592-024-02201-0) (Software packages / Single cell large model)
- Awesome-Scientific-Datasets-and-LLMs - scGPT - omics | 30k / 300k / 3M / 33M | N/A | N/A | 2023.04 | ✅ | (🤖 Scientific Models / 🧬 Life Sciences)
- awesome-ai-for-science - scGPT - Single-cell analysis with transformers (🔬 Domain-Specific Applications / 🧬 Biology & Medicine)
- awesome-computational-biology - scGPT - A transformer-based foundation model pretrained on millions of single-cell profiles to support various single-cell analysis tasks. (Drug Response Prediction / Foundation models)