https://github.com/cameronmartino/gemelli-demo

https://github.com/cameronmartino/gemelli-demo

Last synced: 3 months ago
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• Host: GitHub
• URL: https://github.com/cameronmartino/gemelli-demo
• Owner: cameronmartino
• Created: 2021-03-28T22:47:04.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2021-03-29T00:57:09.000Z (about 4 years ago)
• Last Synced: 2025-01-19T20:39:41.613Z (4 months ago)
• Language: Jupyter Notebook
• Size: 34 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
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Demo for Compositional Analysis of Microbiome Data Workshop

* Additional time series analysis resources:

    * [Stray](https://github.com/jsilve24/stray) Multinomial Logistic-Normal Models (really fast)

    * [MTV-LMM](https://github.com/cozygene/MTV-LMM) (Microbial Temporal Variability Linear Mixed Model)

    * Statistical and visual comparisons of longitudinal study designs and paired samples with [q2-longitudinal](https://docs.qiime2.org/2021.2/tutorials/longitudinal/).