https://github.com/cbrueffer/phd_thesis

LaTeX sources for my PhD thesis RNA Sequencing for Molecular Diagnostics in Breast Cancer at the Lund University Faculty of Medicine (published December 2020).
https://github.com/cbrueffer/phd_thesis

bioinformatics breast-cancer cancer genomics latex lund lund-university lunds-universitet phd-thesis rna-seq scanb template transcriptomics

Last synced: 29 days ago
JSON representation

LaTeX sources for my PhD thesis RNA Sequencing for Molecular Diagnostics in Breast Cancer at the Lund University Faculty of Medicine (published December 2020).

• Host: GitHub
• URL: https://github.com/cbrueffer/phd_thesis
• Owner: cbrueffer
• License: cc-by-4.0
• Created: 2020-12-02T12:02:26.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2021-09-29T07:06:33.000Z (about 3 years ago)
• Last Synced: 2024-10-13T13:14:07.354Z (2 months ago)
• Topics: bioinformatics, breast-cancer, cancer, genomics, latex, lund, lund-university, lunds-universitet, phd-thesis, rna-seq, scanb, template, transcriptomics
• Language: TeX
• Homepage:
• Size: 13.4 MB
• Stars: 0
• Watchers: 3
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md

Awesome Lists containing this project

README

        
# Latex Sources for my PhD Thesis *RNA Sequencing for Molecular Diagnostics in Breast Cancer*

This repository houses the Latex sources for my PhD thesis entitled [*RNA Sequencing for Molecular Diagnostics in Breast Cancer*](https://portal.research.lu.se/portal/files/88190954/Brueffer_PhD_Thesis.pdf), written at the Lund University Faculty of Medicine and published in December 2020.

The thesis was written using [Overleaf](https://www.overleaf.com) and is based on an [Overleaf template by Daniel Carrera](https://www.overleaf.com/latex/templates/template-for-phd-thesis-template-for-astronomy-at-lund-university/dppmypbdngjv), which in turn is based on / inspired by the official [Lund University Media-Tryck Latex template](https://www.mediatryck.lu.se/en/phd-students).

## Images

Copyrighted images included in the thesis cannot be found in this repository; instead placeholder figures are included. The original images can be found in / downloaded from the original publications/sources:

- [Hanahan and Weinberg (2011)](https://dx.doi.org/10.1016/j.cell.2011.02.013) (Figure 6)

- [Terese Winslow LLC, Medical and Scientific Illustration](https://www.teresewinslow.com/#/breast/)

- [Cardoso et al (2019)](https://dx.doi.org/10.1093/annonc/mdz173) (Figures 1 and 2)

- [Chaitankar et al (2016)](https://dx.doi.org/10.1016/j.preteyeres.2016.06.001) (Figure 2)

The generator scripts for the remaining images can be found at https://github.com/cbrueffer/phd_thesis_plots and https://github.com/cbrueffer/scanb_map.