https://github.com/cellgeni/scsajr
R package for nf-scsajr
https://github.com/cellgeni/scsajr
Last synced: 4 months ago
JSON representation
R package for nf-scsajr
- Host: GitHub
- URL: https://github.com/cellgeni/scsajr
- Owner: cellgeni
- License: other
- Created: 2025-05-21T16:04:28.000Z (about 1 year ago)
- Default Branch: main
- Last Pushed: 2025-09-09T10:35:50.000Z (9 months ago)
- Last Synced: 2025-09-10T04:57:30.393Z (9 months ago)
- Language: HTML
- Homepage:
- Size: 53.6 MB
- Stars: 2
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# scsajr
Utility Functions used in cellgeni/nf-scsajr Nextflow Pipeline.
This package includes R functions used in cellgeni/nf-scsajr nextflow pieline,
which quantifies alternative splicing in single-cell transciptome data.
Please check: [cellgeni/nf-scsajr](https://github.com/cellgeni/nf-scsajr)
## Installation
You can install the development version of scsajr from [GitHub](https://github.com/) with:
``` r
# install.packages("pak")
pak::pak("github::cellgeni/scsajr")
```
## Tutorial
Please check tutorial directory for the usage of functions