https://github.com/cheaterpaul/smith-waterman-alignment

multithreading smith waterman alignment algorithm in c++
https://github.com/cheaterpaul/smith-waterman-alignment

Last synced: 2 months ago
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multithreading smith waterman alignment algorithm in c++

• Host: GitHub
• URL: https://github.com/cheaterpaul/smith-waterman-alignment
• Owner: Cheaterpaul
• Created: 2020-08-05T12:54:49.000Z (almost 5 years ago)
• Default Branch: master
• Last Pushed: 2020-09-23T14:10:24.000Z (over 4 years ago)
• Last Synced: 2025-01-27T20:43:36.600Z (4 months ago)
• Language: C++
• Size: 13.7 KB
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: ReadMe.md

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README

        
## Compile

1. run `cmake -S . -B build/`

2. run `make -C build`

## Run

the binary is `build/genom`

run `./build/genom    `

#### plot the result

run `./plotSMSresults.py `