https://github.com/chgibb/PHAT

Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform
https://github.com/chgibb/PHAT

alignment analysis bam bam-files bioinformatics bioinformatics-analysis bioinformatics-tool circos circos-graphs circos-plot dna electron host next-generation-sequencing ngs pathogen phat quality-control snps visualization

Last synced: 3 months ago
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Pathogen-Host Analysis Tool - A modern Next-Generation Sequencing (NGS) analysis platform

• Host: GitHub
• URL: https://github.com/chgibb/PHAT
• Owner: chgibb
• License: gpl-3.0
• Created: 2016-10-11T15:04:29.000Z (about 8 years ago)
• Default Branch: master
• Last Pushed: 2022-12-12T22:23:42.000Z (almost 2 years ago)
• Last Synced: 2024-02-03T12:39:52.831Z (9 months ago)
• Topics: alignment, analysis, bam, bam-files, bioinformatics, bioinformatics-analysis, bioinformatics-tool, circos, circos-graphs, circos-plot, dna, electron, host, next-generation-sequencing, ngs, pathogen, phat, quality-control, snps, visualization
• Language: TypeScript
• Homepage: https://chgibb.github.io/PHATDocs
• Size: 649 MB
• Stars: 17
• Watchers: 4
• Forks: 2
• Open Issues: 76
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

• Awesome-Bioinformatics - PHAT - Point and click, cross platform suite for analysing and visualizing next-generation sequencing datasets. [ [paper-2018](https://pubmed.ncbi.nlm.nih.gov/30561651) | [web](https://chgibb.github.io/PHATDocs) ] (Visualization / Genome Browsers / Gene Diagrams)