https://github.com/choishingwan/BBS

Bio Bank Simulator. A simulation software for generating phenotypes from UK biobank data
https://github.com/choishingwan/BBS

Last synced: about 2 months ago
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Bio Bank Simulator. A simulation software for generating phenotypes from UK biobank data

• Host: GitHub
• URL: https://github.com/choishingwan/BBS
• Owner: choishingwan
• License: gpl-3.0
• Created: 2019-02-14T10:58:50.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2020-11-17T20:29:45.000Z (about 4 years ago)
• Last Synced: 2024-08-02T16:47:23.739Z (5 months ago)
• Language: C++
• Size: 236 KB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

• awesome-uk-biobank - BBS

README

        
# BBS

Bio Bank Simulator. A simulation software for generating phenotypes from UK biobank data

Biobank Simulation Tool

```

Usage: BBS [options]

Options:

    --input   | -i    Input file prefix

    --out     | -o    Output file prefix

    

    --num     | -n    Number of Causal SNPs

    

    --effect  | -e    Effect size distribution.

    

                      0 for exponential

                      

                      1 for Chi-Square

                      

                      2 for Normal Distribution

                      

    --fix     | -f    Fixed effect

    

    --extract | -E    List of SNPs to extract.

    

    --keep    | -k    List of samples to keep

    

    --thread  | -t    Number of thread used

    

    --herit   | -H    List of heritability to construct

    

    --seed    | -s    Seed for random generator

    

    --help    | -h    Display this help message

```