https://github.com/chris1221/corge

Evaluation of Simultaneous Inference Methods for the Human Genome.
https://github.com/chris1221/corge

genetics high-performance-computing multiple-testing-correction simulation

Last synced: 8 months ago
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Evaluation of Simultaneous Inference Methods for the Human Genome.

• Host: GitHub
• URL: https://github.com/chris1221/corge
• Owner: Chris1221
• License: apache-2.0
• Created: 2015-06-11T17:35:33.000Z (over 10 years ago)
• Default Branch: master
• Last Pushed: 2017-08-08T12:18:59.000Z (over 8 years ago)
• Last Synced: 2025-05-17T12:13:39.531Z (10 months ago)
• Topics: genetics, high-performance-computing, multiple-testing-correction, simulation
• Language: R
• Homepage: http://chrisbcole.me/coRge/
• Size: 230 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 8
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

          
`coRge`:  Software for the Examination of Multiple Correction Methodologies in Accurate Genomic Environments

------------------------------

## Status:

| Branch | Travis-CI | Appveyor | Coverage | CRAN | Downloads | Publication |

| :--- | :---: | :---: | :--: | :---: | :---: | :---: |

| `master` | ![Build Status](https://travis-ci.org/Chris1221/coR-ge.svg?branch=master) | ![Build status](https://ci.appveyor.com/api/projects/status/v64oe85q29btxln9?svg=true) | [![codecov.io](https://codecov.io/github/Chris1221/coR-ge/coverage.svg?branch=master)](https://codecov.io/github/Chris1221/coR-ge?branch=master) | ![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/coRge) | ![](http://cranlogs.r-pkg.org/badges/coRge) | GitXiv |

| `devel` |![Build Status](https://travis-ci.org/Chris1221/coR-ge.svg?branch=devel) | [![Build status](https://ci.appveyor.com/api/projects/status/v64oe85q29btxln9?svg=true)](https://ci.appveyor.com/project/Chris1221/miner) | [![codecov.io](https://codecov.io/github/Chris1221/coR-ge/coverage.svg?branch=devel)](https://codecov.io/github/Chris1221/coR-ge?branch=devel) | ![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/coRge) | ![](http://cranlogs.r-pkg.org/badges/coRge) | GitXiv | 

-----------------------------------

To install:

```R

if(!require(devtools)) install.packages("devtools")

devtools::install_github("Chris1221/coR-ge")

```

To run:

```R

library(coRge)

coRge::analyze(gen = genEx, summary = exampleSamp, output = "/dev/null") 

```

If everything is configured properly, this should return `0`. If it does, please move on to the quick start guide and tutorial.