https://github.com/cihga39871/clasnip.com
Closely-related microorganism classification based on SNPs & multilocus sequencing typing (MLST)
https://github.com/cihga39871/clasnip.com
Last synced: 3 months ago
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Closely-related microorganism classification based on SNPs & multilocus sequencing typing (MLST)
- Host: GitHub
- URL: https://github.com/cihga39871/clasnip.com
- Owner: cihga39871
- Created: 2021-09-16T20:47:22.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2025-02-21T15:13:52.000Z (3 months ago)
- Last Synced: 2025-02-21T15:29:46.836Z (3 months ago)
- Language: Julia
- Size: 2.05 MB
- Stars: 1
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
# [Clasnip.com](http://www.clasnip.com)
Closely-related microorganism classification based on SNPs & multilocus sequencing typing (MLST).
## Documentation
[](https://cihga39871.github.io/Clasnip.com/dev)
## Citation
If you use Clasnip web service, please cite:
> Chuan J, Xu H, Hammill DL, Hale L, Chen W, Li X. 2023. Clasnip: a web-based intraspecies classifier and multi-locus sequence typing for pathogenic microorganisms using fragmented sequences. PeerJ 11:e14490 https://doi.org/10.7717/peerj.14490
## Supports
The GitHub page is for technical supports. To start a new classification analysis, please move to [Clasnip.com](http://www.clasnip.com).
If you have feature requests or any suggestions, please feel free to search and create a new issue **[here](https://github.com/cihga39871/Clasnip.com/issues)**.
If you found bugs, please report an issue **[here](https://github.com/cihga39871/Clasnip.com/issues)** with details, such as job ID, procedures to reproduce it, the database and query sequences, analysis time.