https://github.com/cjfields/p6-bio-htslib

Perl6 NativeCall bindings to htslib
https://github.com/cjfields/p6-bio-htslib

Last synced: 13 days ago
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Perl6 NativeCall bindings to htslib

• Host: GitHub
• URL: https://github.com/cjfields/p6-bio-htslib
• Owner: cjfields
• License: artistic-2.0
• Created: 2014-12-12T20:52:17.000Z (about 10 years ago)
• Default Branch: master
• Last Pushed: 2015-02-23T15:48:10.000Z (almost 10 years ago)
• Last Synced: 2024-11-05T20:51:37.442Z (2 months ago)
• Language: Perl6
• Size: 262 KB
• Stars: 2
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# Bio-HTSLib

Initial NativeCall-based bindings to the htslib library for

high-throughput sequence analysis: 

https://github.com/samtools/htslib

# Targeted htslib version

The targeted tagged release of htslib is currently 1.1 and

is included as a submodule of this repository.  In order to

run a complete code checkout (including the submodules) use:

```

git clone --recursive https://github.com/cjfields/p6-Bio-HTSLib.git

```

Not sure if this will work with panda yet.

# Build and test

You should install panda first (https://github.com/tadzik/panda/).  Then

```

panda-build

panda-test

```

Alternatively one can also use @prove@:

```

panda-build

prove -e 'perl6' -lr t/

```