https://github.com/cmdcolin/1000genomes_jbrowse
https://github.com/cmdcolin/1000genomes_jbrowse
Last synced: 4 months ago
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- Host: GitHub
- URL: https://github.com/cmdcolin/1000genomes_jbrowse
- Owner: cmdcolin
- Created: 2018-12-19T00:34:54.000Z (over 7 years ago)
- Default Branch: master
- Last Pushed: 2019-01-13T06:17:52.000Z (over 7 years ago)
- Last Synced: 2025-03-04T23:31:42.808Z (over 1 year ago)
- Size: 86.9 KB
- Stars: 1
- Watchers: 3
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
# 1000 genomes jbrowse
This creates JBrowse instance with fully remote datasets loaded from the Amazon S3 bucket with 1000 genomes data with
- Low coverage BAM
- High coverage BAM
- CRAM
- Phase 1 VCF
- Phase 3 VCF
- CHM1 PacBio long reads
- Moleculo synthetic long reads
- Some functional analysis VCF tracks
- Complete genomics analysis files