https://github.com/cmdcolin/interproscan2genome
https://github.com/cmdcolin/interproscan2genome
Last synced: 8 days ago
JSON representation
- Host: GitHub
- URL: https://github.com/cmdcolin/interproscan2genome
- Owner: cmdcolin
- Created: 2024-10-30T04:23:37.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2024-10-31T20:25:11.000Z (over 1 year ago)
- Last Synced: 2025-07-28T17:45:15.072Z (11 months ago)
- Language: JavaScript
- Size: 13.7 KB
- Stars: 1
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
Awesome Lists containing this project
README
# interproscan2genome
## Install
```bash
npm install -g interproscan2genome
```
## Usage
```bash
interproscan2genome --genomeGFF genes.gff --interproGFF domains.gff > domainsOnTheGenome.gff
```
If you get out of memory error, add the following to add more memory for node.js
```bash
NODE_OPTIONS=--max-old-space-size=8000 interproscan2genome --genomeGFF genes.gff --interproGFF domains.gff > domainsOnTheGenome.gff
```