https://github.com/cmdcolin/jbrowse-plugin-ucsc-api

A JBrowse 2 plugin for accessing the UCSC API
https://github.com/cmdcolin/jbrowse-plugin-ucsc-api

Last synced: 4 days ago
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A JBrowse 2 plugin for accessing the UCSC API

• Host: GitHub
• URL: https://github.com/cmdcolin/jbrowse-plugin-ucsc-api
• Owner: cmdcolin
• Created: 2020-07-14T18:14:36.000Z (over 4 years ago)
• Default Branch: master
• Last Pushed: 2023-01-07T20:05:56.000Z (almost 2 years ago)
• Last Synced: 2024-11-06T12:06:13.927Z (13 days ago)
• Language: JavaScript
• Size: 1010 KB
• Stars: 1
• Watchers: 2
• Forks: 3
• Open Issues: 19
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md

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README

        
# jbrowse-plugin-ucsc

This plugin adapts the [UCSC API](https://genome.ucsc.edu/goldenPath/help/api.html)

## Demo

https://s3.amazonaws.com/jbrowse.org/code/jb2/main/index.html?config=https%3A%2F%2Funpkg.com%2Fjbrowse-plugin-ucsc%2Fdist%2Fconfig.json&session=share-wyY8ZgC9uY&password=CtcMX

## Screenshot

![](img/1.png)

## To use in jbrowse-web

Add to the "plugins" of your JBrowse Web config:

```json

{

  "plugins": [

    {

      "name": "UCSC",

      "url": "https://unpkg.com/jbrowse-plugin-ucsc/dist/jbrowse-plugin-ucsc.umd.production.min.js"

    }

  ]

}

```

You can also download this file to your local server if you don't want to use a CDN

## To use in embedded @jbrowse/react-linear-genome-view

See [DEVELOPERS.md](DEVELOPERS.md)