https://github.com/codecreatede/rust-pangenome

rust pangenome for pangenome alignments
https://github.com/codecreatede/rust-pangenome

bioinformatics genome-analysis metagenomics metagenomics-data rust-lang

Last synced: about 1 month ago
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rust pangenome for pangenome alignments

• Host: GitHub
• URL: https://github.com/codecreatede/rust-pangenome
• Owner: codecreatede
• Created: 2024-11-05T12:32:11.000Z (about 2 months ago)
• Default Branch: main
• Last Pushed: 2024-11-07T10:46:54.000Z (about 2 months ago)
• Last Synced: 2024-11-07T11:36:31.675Z (about 2 months ago)
• Topics: bioinformatics, genome-analysis, metagenomics, metagenomics-data, rust-lang
• Language: Rust
• Homepage:
• Size: 0 Bytes
• Stars: 0
• Watchers: 1
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# rust-pangenome

- pangenome extraction following the protein alignment. 

- extract the sequences from the alignment for all the regions that were aligned.

- writing code for all these separately and after that it will be merged into a single rust-webapplication using the Actix frame. 

- it also plots the graphs and the sequence plots. 

```

cargo build 

```

Gaurav Sablok