https://github.com/complextissue/pytximport
Feature-rich Python implementation of the tximport package for gene count estimation.
https://github.com/complextissue/pytximport
anndata bioinformatics deseq2 python rna rna-seq scverse tximport
Last synced: 4 months ago
JSON representation
Feature-rich Python implementation of the tximport package for gene count estimation.
- Host: GitHub
- URL: https://github.com/complextissue/pytximport
- Owner: complextissue
- License: gpl-3.0
- Created: 2024-05-30T10:34:24.000Z (about 2 years ago)
- Default Branch: main
- Last Pushed: 2025-10-24T21:41:50.000Z (8 months ago)
- Last Synced: 2026-02-21T17:29:34.875Z (4 months ago)
- Topics: anndata, bioinformatics, deseq2, python, rna, rna-seq, scverse, tximport
- Language: Python
- Homepage: https://pytximport.complextissue.com/en/stable/start.html
- Size: 108 MB
- Stars: 43
- Watchers: 2
- Forks: 2
- Open Issues: 1
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Metadata Files:
- Readme: README.md
- Contributing: .github/CONTRIBUTING.md
- Funding: .github/FUNDING.yml
- License: LICENSE
- Code of conduct: .github/CODE_OF_CONDUCT.md
- Citation: CITATION.cff