https://github.com/compomics/compomics-sigpep

Predicting peptide signatures for targeted proteomics.
https://github.com/compomics/compomics-sigpep

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Predicting peptide signatures for targeted proteomics.

• Host: GitHub
• URL: https://github.com/compomics/compomics-sigpep
• Owner: CompOmics
• Created: 2015-04-13T09:18:31.000Z (almost 11 years ago)
• Default Branch: master
• Last Pushed: 2018-03-16T10:05:31.000Z (about 8 years ago)
• Last Synced: 2025-09-10T05:11:55.082Z (7 months ago)
• Language: Java
• Homepage:
• Size: 1.31 MB
• Stars: 0
• Watchers: 15
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE-2.0.txt

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README

          
# compomics-sigpep

![logo](http://genesis.ugent.be/uvpublicdata/compomics-sigpep/graph_header_logo.png) 

 * [Project Description](#project-description)

 * [Usage](#usage)

 * [Project Support](#project-support)

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## Project Description

We have created a new software platform called Sigpep that analyses transition redundancy in SRM assays. Building on this platform, we also created a web application to generate transition sets with unique signatures for targeted peptides. The platform has been made available under the permissive Apache 2.0 open source license, and the web application can be accessed from http://iomics.ugent.be/sigpep.

### Citation

[Helsens et al: Proteomics. 2012 Apr;12(8):1142-6.](http://www.ncbi.nlm.nih.gov/pubmed/22577015)

[Go to top of page](#compomics-sigpep)

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## Usage

Read the [wiki](https://github.com/compomics/compomics-sigpep/wiki) page for further documentation on SigPep and the SigPep web application.

[Go to top of page](#compomics-sigpep)

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## Project Support

The compomics-sigpep project is grateful for the support by:

| Compomics | VIB | Ghent University|

|:--:|:--:|:--:|

| [![compomics](http://genesis.ugent.be/uvpublicdata/image/compomics.png)](http://www.compomics.com) | [![vib](http://genesis.ugent.be/uvpublicdata/image/vib.png)](http://www.vib.be) | [![ugent](http://genesis.ugent.be/uvpublicdata/image/ugent.png)](http://www.ugent.be/en) |

[Go to top of page](#compomics-sigpep)

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| IntelliJ | Netbeans | Java | Maven |

|:--:|:--:|:--:|:--:|

| [![intellij](https://www.jetbrains.com/idea/docs/logo_intellij_idea.png)](https://www.jetbrains.com/idea/) | [![netbeans](https://netbeans.org/images_www/visual-guidelines/NB-logo-single.jpg)](https://netbeans.org/) | [![java](http://genesis.ugent.be/uvpublicdata/image/java.png)](http://java.com/en/) | [![maven](http://genesis.ugent.be/uvpublicdata/image/maven.png)](http://maven.apache.org/) |

[Go to top of page](#compomics-sigpep)