https://github.com/computationalphysiology/gotran

Library for declaring and translating ODEs
https://github.com/computationalphysiology/gotran

Last synced: 3 months ago
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Library for declaring and translating ODEs

• Host: GitHub
• URL: https://github.com/computationalphysiology/gotran
• Owner: ComputationalPhysiology
• License: lgpl-3.0
• Created: 2019-09-05T09:19:44.000Z (over 5 years ago)
• Default Branch: main
• Last Pushed: 2024-07-01T21:50:15.000Z (7 months ago)
• Last Synced: 2024-10-06T08:45:18.363Z (4 months ago)
• Language: Python
• Homepage: http://computationalphysiology.github.io/gotran/
• Size: 10.7 MB
• Stars: 2
• Watchers: 3
• Forks: 1
• Open Issues: 4
• Metadata Files:
  • Readme: README.md
  • Contributing: CONTRIBUTING.md
  • License: LICENSE

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# Gotran - General ODE TRAnslator

Gotran:

- provides a Python interface to declare arbitrary ODEs.

- provides an interface for generating CUDA/C/C++/OpenCL/Julia/Python/Matlab code for a number of functions including the right hand side and symbolic generation of a Jacobian.

- is intentionally lightweight, and could be interfaced by other

  Python libraries needing functionalities to abstract a general

  ODE.

- depends on NumPy, and on SymPy. See further instructions in

  INSTALL

- can load models from external ODE description files such as CellML

## Install

You can install gotran through pip

```

python -m pip install gotran

```

or if you want to work with the latest version you can install the developement version by either cloning the repository and run

```

python -m pip install git+https://github.com/ComputationalPhysiology/gotran.git

```

## Documentation

Documentation can be found here: 

## Source code

Source code can be found at .

## License

gotran is free software: you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

gotran is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.

You should have received a copy of the GNU Lesser General Public License along with gotran. If not, see .

## Contributors

Gotran is developed by Johan Hake.

The version of gotran found in this repository is maintained by Henrik Finsberg and Kristian Hustad.