https://github.com/congyulu-bioinfo/PHP

Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). PHP takes the complete or partial genomic sequences of prokaryotic viruses as inputs. For each virus sequence, PHP automatically calculates the probability of host for 60,105 prokaryotic genomes and takes the prokaryotic genome with the largest probability as the predicted host. PHP would output the name of the prokaryotic genome with the largest score, and output the host score of all prokaryotic genomes.
https://github.com/congyulu-bioinfo/PHP

Last synced: about 2 months ago
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Prokaryotic virus Host Predictor (PHP) is a computational tool for host prediction of prokaryotic viruses based on Gaussian Model (GM). PHP takes the complete or partial genomic sequences of prokaryotic viruses as inputs. For each virus sequence, PHP automatically calculates the probability of host for 60,105 prokaryotic genomes and takes the prokaryotic genome with the largest probability as the predicted host. PHP would output the name of the prokaryotic genome with the largest score, and output the host score of all prokaryotic genomes.

• Host: GitHub
• URL: https://github.com/congyulu-bioinfo/PHP
• Owner: congyulu-bioinfo
• License: lgpl-3.0
• Created: 2019-12-12T07:43:02.000Z (over 5 years ago)
• Default Branch: master
• Last Pushed: 2021-01-08T17:52:10.000Z (over 4 years ago)
• Last Synced: 2023-10-20T01:29:04.237Z (over 1 year ago)
• Language: Python
• Homepage:
• Size: 466 MB
• Stars: 9
• Watchers: 1
• Forks: 1
• Open Issues: 2
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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