https://github.com/cossio/fastxdoreaders.jl

https://github.com/cossio/fastxdoreaders.jl

Last synced: 3 months ago
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• Host: GitHub
• URL: https://github.com/cossio/fastxdoreaders.jl
• Owner: cossio
• License: mit
• Created: 2023-09-22T08:53:49.000Z (almost 2 years ago)
• Default Branch: main
• Last Pushed: 2024-06-24T23:32:49.000Z (about 1 year ago)
• Last Synced: 2025-02-08T00:43:22.105Z (5 months ago)
• Language: Julia
• Size: 20.5 KB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.md
  • License: LICENSE

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README

        
# FASTXDoReaders

This package exports two functions: `fasta_reader` and `fastq_reader`. These functions allow you to write things like:

```julia

using FASTXDoReaders: fasta_reader

using CodecZlib: GzipDecompressorStream

fasta_reader(GzipDecompressorStream(open("foo.fna.gz"))) do reader

    # ...

end

```

which then takes care of closing the stream automatically after the closure finishes running.