https://github.com/cscfi/csc-env-matlab

Containerized MATLAB and MATLAB Parallel Server environment for HPC clusters at CSC.
https://github.com/cscfi/csc-env-matlab

apptainer-container cluster hpc linux matlab singularity-container

Last synced: about 18 hours ago
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Containerized MATLAB and MATLAB Parallel Server environment for HPC clusters at CSC.

• Host: GitHub
• URL: https://github.com/cscfi/csc-env-matlab
• Owner: CSCfi
• License: mit
• Created: 2024-01-09T13:08:45.000Z (12 months ago)
• Default Branch: main
• Last Pushed: 2024-10-14T07:32:41.000Z (3 months ago)
• Last Synced: 2024-11-10T11:33:17.278Z (about 2 months ago)
• Topics: apptainer-container, cluster, hpc, linux, matlab, singularity-container
• Language: Shell
• Homepage:
• Size: 206 KB
• Stars: 0
• Watchers: 1
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

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README

        
# csc-env-matlab

This repository contains MATLAB containers designed for use in High-Performance Computing (HPC) clusters.

The container definitions use the official [MATLAB container dependencies](https://github.com/mathworks-ref-arch/container-images) and the [MATLAB Package Manager (MPM)](https://github.com/mathworks-ref-arch/matlab-dockerfile) to install MATLAB and all available toolboxes on Linux.

The installation also includes the [MATLAB Proxy](https://github.com/mathworks/matlab-proxy) for an HTML-based web interface.

We use Ansible playbooks to install the containerized MATLAB on the clusters.

We can build a specific MATLAB container using the appropriate build script which uses Apptainer internally as follows:

```bash

./containers/r2024b/ubuntu22.04/build.sh sif

```

To run with the default license:

```bash

apptainer exec --bind /run/user ./containers/r2024b/ubuntu22.04/matlab.sif matlab

```

To run with a custom license:

```bash

apptainer exec --bind /run/user --env "MLM_LICENSE_FILE=" ./containers/r2024b/ubuntu22.04/matlab.sif matlab

```

Documentation for Puhti and LUMI installation is available on [documentation](https://docs.csc.fi/apps/matlab/).