https://github.com/csiro-enviro-informatics/loci-notebooks

Jupyter notebooks for Loc-I
https://github.com/csiro-enviro-informatics/loci-notebooks

Last synced: about 1 month ago
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Jupyter notebooks for Loc-I

• Host: GitHub
• URL: https://github.com/csiro-enviro-informatics/loci-notebooks
• Owner: CSIRO-enviro-informatics
• License: other
• Created: 2020-02-26T00:57:30.000Z (almost 5 years ago)
• Default Branch: master
• Last Pushed: 2021-08-06T01:14:23.000Z (over 3 years ago)
• Last Synced: 2024-11-19T00:45:19.949Z (3 months ago)
• Language: Jupyter Notebook
• Size: 18.7 MB
• Stars: 0
• Watchers: 7
• Forks: 0
• Open Issues: 1
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# loci-notebooks

[![Build Status](https://travis-ci.org/CSIRO-enviro-informatics/loci-notebooks.svg?branch=master)](https://travis-ci.org/CSIRO-enviro-informatics/loci-notebooks)

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/CSIRO-enviro-informatics/loci-notebooks/HEAD)

Jupyter notebooks for Loc-I

## Pre-requisites

* docker

* docker-compose

## Quickstart

Using a minimal docker stack (python only)

```

$ docker-compose up -d --build

```

Using a minimal docker stack (python only) using docker image (no building)

```

$ docker-compose -f docker-compose.useimages.yml up -d 

```

Running `docker-compose logs` should give you the session token to use to login via http://localhost:888

To stop the notebook server:

```

$ docker-compose down -v

```

### R/Python option

You can also run these with R and Python via the datascience Jupyter stack

```

$ docker-compose -f docker-compose.datascience.yml up -d --build

```

Running `docker-compose logs` should give you the session token to use to login via http://localhost:888

To stop the notebook server:

```

$ docker-compose down -v

```