https://github.com/csoneson/biocbuildfailurediagnosis

https://github.com/csoneson/biocbuildfailurediagnosis

Last synced: 16 days ago
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• Host: GitHub
• URL: https://github.com/csoneson/biocbuildfailurediagnosis
• Owner: csoneson
• License: other
• Created: 2020-12-12T12:05:14.000Z (about 4 years ago)
• Default Branch: main
• Last Pushed: 2024-12-21T18:08:03.000Z (about 1 month ago)
• Last Synced: 2025-01-04T14:11:48.653Z (19 days ago)
• Language: R
• Size: 93.8 KB
• Stars: 1
• Watchers: 2
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.Rmd
  • License: LICENSE

Awesome Lists containing this project

README

        
---

output: github_document

---

```{r, include = FALSE}

knitr::opts_chunk$set(

  collapse = TRUE,

  comment = "#>",

  fig.path = "man/figures/README-",

  out.width = "100%"

)

```

# Diagnose Bioconductor package build failures

[![R-CMD-check](https://github.com/csoneson/BiocBuildFailureDiagnosis/workflows/R-CMD-check/badge.svg)](https://github.com/csoneson/BiocBuildFailureDiagnosis/actions)

The purpose of this repository is to collect functionality for diagnosing build failures in Bioconductor packages. Contributions from the community are welcome - please fork this repository and make a pull request with your contributions. Also add your name among the contributors below. 

For more information, refer to the corresponding entry in the [BiocChallenges](https://github.com/kevinrue/BiocChallenges/) repository. 

## Contributors

- Charlotte Soneson (@csoneson)

- Lluís Revilla Sancho (@llrs)

## Installation

You can install the released version of BiocBuildFailureDiagnosis from [GitHub](https://github.com/) with:

``` r

# install.packages("devtools")

devtools::install_github("csoneson/BiocBuildFailureDiagnosis")

```

## Example

This is a basic example which shows you how to solve a common problem:

```{r example}

library(BiocBuildFailureDiagnosis)

explainBiocBuildFailure("Rhisat2")

```