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https://github.com/csoneson/compcoder

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Host: GitHub
URL: https://github.com/csoneson/compcoder
Owner: csoneson
Created: 2014-04-10T06:03:04.000Z (over 10 years ago)
Default Branch: devel
Last Pushed: 2024-11-02T16:04:07.000Z (2 months ago)
Last Synced: 2024-12-18T11:47:06.293Z (21 days ago)
Language: HTML
Homepage: http://csoneson.github.io/compcodeR/index.html
Size: 4.39 MB
Stars: 11
Watchers: 4
Forks: 3
Open Issues: 0
Metadata Files:
- Readme: README.md
- Changelog: NEWS

Awesome Lists containing this project

README

        ## compcodeR

[![R build status](https://github.com/csoneson/compcodeR/workflows/R-CMD-check/badge.svg)](https://github.com/csoneson/compcodeR/actions)

**compcodeR** is an R package that provides extensive functionality for comparing results obtained by different methods for differential expression analysis of (mainly) RNAseq data. It also contains functions for simulating count data and interfaces to several packages for performing the differential expression analysis.

The release version of **compcodeR** can be installed via [Bioconductor](http://www.bioconductor.org/packages/release/bioc/html/compcodeR.html):

```

install.packages("BiocManager")

BiocManager::install("compcodeR")

```

The most recent (development) version can also be installed from GitHub directly:

```

BiocManager::install("csoneson/compcodeR")

```