https://github.com/ctb/khmer-ngram

Simple probabilistic de Bruijn graph representation
https://github.com/ctb/khmer-ngram

Last synced: 11 months ago
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Simple probabilistic de Bruijn graph representation

• Host: GitHub
• URL: https://github.com/ctb/khmer-ngram
• Owner: ctb
• Created: 2011-03-11T22:10:22.000Z (over 15 years ago)
• Default Branch: master
• Last Pushed: 2011-03-14T01:42:33.000Z (over 15 years ago)
• Last Synced: 2025-04-05T11:11:27.002Z (about 1 year ago)
• Language: Python
• Homepage:
• Size: 2.41 MB
• Stars: 13
• Watchers: 3
• Forks: 4
• Open Issues: 1
• Metadata Files:
  • Readme: README.txt

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README

          
Code from my PyCon 2011 talk on building ASCII de Bruijn graphs on top

of a Bloom filter.

See: http://www.slideshare.net/c.titus.brown/pycon-2011-talk-ngram-assembly-with-bloom-filters

--titus

Mar 13, 2011