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https://github.com/cvdlab/lar-running-demo

Set of scripts to run a lar demo session to extract models from images.
https://github.com/cvdlab/lar-running-demo

Last synced: 10 months ago
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Set of scripts to run a lar demo session to extract models from images.

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lar-running-demo
=============

A demo beta software (set of scripts) to extract models from medical images.

Spftware has been tested on Ubuntu 12.04 LTS (x64).

MIT License.

Prerequisites
-------------
Every script check for its own prerequisites at the right time.
A list of them are:

* *NIX like OS (untested on Windows)
* Bash
* Python (*PyPlasm, SciPy, NumPy, Cython, pypng, simplejson or json, requests, termcolor, matplotlib*)
* Java
* OpenCL
* Imagemagik
* dcm2pnm

startConversion.sh
-------------
It will extract all the possible models (the number depends of the quantized colors) automatically. Might take a while.

Input images allowed: *png, jpg, dcm*

Two type of executions:

* Interactive
* Command Line (use -h to know the exact paramaters)

startConversion-singleColor.sh
-------------
It will extract one of the possible model (the number depends of the quantized colors) automatically: it'll be choosen by selecting the index of the quantized color at runtime (mind that the quantized colors are always ordered in ascending order).

Input images allowed: *png, jpg, dcm*

Two type of executions:

* Interactive
* Command Line (use -h to know the exact paramaters)

visualize.sh
-------------
Given a Wavefront STL model (*obj*) it will show it using available on system visualizers.

Supported visualizers: *PyPlasm, MeshLab, Manta*

Two type of executions:

* Interactive
* Command Line (use -h to know the exact paramaters)