https://github.com/cytomining/cytotable-benchmarks

Benchmarks for CytoTable and related.
https://github.com/cytomining/cytotable-benchmarks

Last synced: 12 months ago
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Benchmarks for CytoTable and related.

• Host: GitHub
• URL: https://github.com/cytomining/cytotable-benchmarks
• Owner: cytomining
• License: bsd-3-clause
• Created: 2023-06-22T19:27:41.000Z (almost 3 years ago)
• Default Branch: main
• Last Pushed: 2025-05-15T15:34:41.000Z (about 1 year ago)
• Last Synced: 2025-06-16T22:13:00.019Z (about 1 year ago)
• Language: Jupyter Notebook
• Size: 7.85 MB
• Stars: 0
• Watchers: 1
• Forks: 1
• Open Issues: 3
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

          
# 🛠️ CytoTable benchmarks

[![DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.15425830.svg)](https://doi.org/10.5281/zenodo.15425830)

A repository for analyzing various benchmarks related to [CytoTable](https://github.com/cytomining/CytoTable).

## Installation

Please use Python [`poetry`](https://python-poetry.org/) to run and install related content.

```bash

# after installing poetry, create the environment

poetry install

```

## Development

Please follow installation steps above and then use a relevant Jupyter environment to open and explore the notebooks under the `notebooks` directory.

```bash

# after creating poetry environment, run jupyter

poetry run jupyter lab

```