https://github.com/dasmoth/dalliance

Interactive web-based genome browser.
https://github.com/dasmoth/dalliance

Last synced: 2 months ago
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Interactive web-based genome browser.

• Host: GitHub
• URL: https://github.com/dasmoth/dalliance
• Owner: dasmoth
• License: bsd-2-clause
• Created: 2010-07-01T18:29:16.000Z (over 14 years ago)
• Default Branch: master
• Last Pushed: 2019-08-28T20:49:43.000Z (over 5 years ago)
• Last Synced: 2024-11-03T11:07:27.120Z (3 months ago)
• Language: JavaScript
• Homepage: http://www.biodalliance.org/
• Size: 5.1 MB
• Stars: 226
• Watchers: 34
• Forks: 68
• Open Issues: 68
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

Awesome Lists containing this project

• Awesome-Bioinformatics - biodalliance - Embeddable genome viewer. Integration data from a wide variety of sources, and can load data directly from popular genomics file formats including bigWig, BAM, and VCF. (Visualization / Genome Browsers / Gene Diagrams)

README

        
Biodalliance: fast, embeddable genome visualization

=========================

Dalliance is a genome viewing tool that aims to offer a high

level of interactivity while working entirely within your web

browser. It works with current versions of Chrome, Firefox, and

Safari and (with minor visual glitches) Internet Explorer 11.  It

is also usable with current mobile web browsers.

To try it, visit [https://www.biodalliance.org/human37.html](https://www.biodalliance.org/human37.html).

Development

-----------

Dalliance has now switched to a [Gulp](http://gulpjs.com/)-based build

system.  It it still possible to use the files in the js directory

directly, but this is now deprecated and may not be supported in future.

Before building, please install [Node.js](http://nodejs.org/), which

is needed for the NPM package manager.

To build:

        (sudo?) npm install -g gulp

        npm install # Install dependencies

        gulp        # Build Dalliance

...then open any of the HTML files in the `example-browsers` directory

to test.

Documentation

-------------

See [the website](https://www.biodalliance.org).

Reporting bugs

--------------

Dalliance is under active development and we welcome your suggestions.

Right now, probably the best place for bug reports or feature requests

is the [Github issue tracker](https://github.com/dasmoth/dalliance/issues).

There is also a [mailing list](https://groups.google.com/forum/#!forum/biodalliance-dev)

where the project can be discussed.