https://github.com/databio/peppro

A modular, containerized pipeline for PRO-seq data processing
https://github.com/databio/peppro

Last synced: about 1 year ago
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A modular, containerized pipeline for PRO-seq data processing

• Host: GitHub
• URL: https://github.com/databio/peppro
• Owner: databio
• License: bsd-2-clause
• Created: 2018-10-22T20:44:37.000Z (over 7 years ago)
• Default Branch: master
• Last Pushed: 2023-11-30T16:38:19.000Z (over 2 years ago)
• Last Synced: 2025-03-26T13:11:21.564Z (over 1 year ago)
• Language: Python
• Homepage: http://peppro.databio.org/
• Size: 33.9 MB
• Stars: 10
• Watchers: 13
• Forks: 2
• Open Issues: 15
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

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---

[![PEP compatible](http://pepkit.github.io/img/PEP-compatible-green.svg)](http://pep.databio.org)

PEPPRO is a pipeline designed to process PRO-seq (and GRO-seq) data. For more information see: http://peppro.databio.org/

## Docs

Develop docs with:

```

mkdocs serve -f mkdocs.yml

```

Build and deploy with:

```

mkdocs build -f mkdocs.yml -d $CODEBASE/code.databio.org/peppro

```

## Contributing

Pull requests welcome. Active development should occur in a development or feature branch.

## Contributors

* Jason Smith, jasonsmith@virginia.edu

* Michael Guertin, mjg7y@virginia.edu

* Nathan Sheffield, nathan@code.databio.org

* Others... (add your name)