https://github.com/daviddao/visualise-newick

small website to visualise newick formats
https://github.com/daviddao/visualise-newick

Last synced: about 1 month ago
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small website to visualise newick formats

• Host: GitHub
• URL: https://github.com/daviddao/visualise-newick
• Owner: daviddao
• Created: 2015-03-13T16:28:27.000Z (over 9 years ago)
• Default Branch: master
• Last Pushed: 2015-03-13T17:02:28.000Z (over 9 years ago)
• Last Synced: 2024-05-01T20:25:50.898Z (7 months ago)
• Language: HTML
• Homepage: http://daviddao.github.io/visualise-newick
• Size: 6.59 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md

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README

        
# Visualizing Newick Formats 

This is a small web service to quickly visualise newick formats

![alt tag](https://raw.github.com/daviddao/visualise-newick/master/pic.png)

## Tree display

You can easily change the way how your tree is displayed by editing the opts in index.html

````

var opts = {

        el : document.getElementById("yourDiv"),

        tree : {

            data : "(homo_sapiens:12,(mus_musculus:12,(danio_rerio:13,(pan_troglodytes:9,(taeniopygia_guttata:10,callithrix_jacchus:11):12):12):10);",  

            width : 500,

            height : 30,

            scale : false,

            layoutInput : "vertical",

        },

        label : {

            fontsize : 18,

            usePics : true, 

            pics : {

                pictureWidth : 20,

                pictureHeight : 20,

            },

        },

        nodes : {

            toggle : true, 

            select: false, 

            size : 5,

            fill : "grey",

            stroke : "black",

            selectedFill : "steelblue",

            selectedSize : 4,

        },

};

````