https://github.com/dessimozlab/sibbiodiversitysummerschool2026topic4
Materials for the 2026 summer school
https://github.com/dessimozlab/sibbiodiversitysummerschool2026topic4
Last synced: 27 days ago
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Materials for the 2026 summer school
- Host: GitHub
- URL: https://github.com/dessimozlab/sibbiodiversitysummerschool2026topic4
- Owner: DessimozLab
- Created: 2026-04-28T14:01:19.000Z (3 months ago)
- Default Branch: main
- Last Pushed: 2026-06-19T10:21:45.000Z (28 days ago)
- Last Synced: 2026-06-19T10:28:47.415Z (28 days ago)
- Language: Jupyter Notebook
- Size: 59.4 MB
- Stars: 1
- Watchers: 0
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# SIBBiodiversitySummerSchool2026Topic4
Materials for the 2026 summer school
# Environment Setup Instructions
This course uses a Conda environment to install the required software.
## 1. Create the virtual environment
From the root directory of the repository, run:
```bash
conda install -n base -c conda-forge mamba
mamba env create -f Module1_AnnotationQuality/environmentT4.yml
```
alternatively...
```bash
python3 -m venv module1env
source module1env/bin/activate
pip install --upgrade pip
pip install -r requirements.txt
```