https://github.com/dewberryants/asciiMol

Curses based ASCII molecule viewer for terminals.
https://github.com/dewberryants/asciiMol

ascii cheminformatics chemistry molecules visualization

Last synced: about 2 months ago
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Curses based ASCII molecule viewer for terminals.

• Host: GitHub
• URL: https://github.com/dewberryants/asciiMol
• Owner: dewberryants
• License: bsd-2-clause
• Created: 2020-09-03T12:48:52.000Z (about 4 years ago)
• Default Branch: master
• Last Pushed: 2023-05-24T12:15:33.000Z (over 1 year ago)
• Last Synced: 2024-07-06T10:43:37.459Z (3 months ago)
• Topics: ascii, cheminformatics, chemistry, molecules, visualization
• Language: Python
• Homepage:
• Size: 810 KB
• Stars: 353
• Watchers: 4
• Forks: 12
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

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README

        
# asciiMOL

[![PyPI version](https://badge.fury.io/py/asciimol.svg)](https://badge.fury.io/py/asciimol)

![Screenshots](https://raw.githubusercontent.com/dewberryants/asciiMol/master/docs/animation.gif)

A basic molecule viewer written in Python, using the ncurses library. Works on any compatible terminal (even on Windows using 

windows-curses).

Features:

* Opening default cartesian .xyz files

* Orthographic view

* Navigation

* Zoom, Rotation, Auto-Rotation

* Bond detection and display

* Support for simple .xyz trajectories

* Optional integration of ASE and RDKit pypi packages for more formats and SMILES

## Installation

```sh

pip install asciimol

```

(Note: pip will install a run script in $HOME/.local/bin/ if you do not install with root permissions, so make sure this

directory is part of your $PATH.)

You can also run

```sh

pip install asciimol[formats,smiles]

```

to automatically install ASE for formats and RDKit for smiles.