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https://github.com/doriantaylor/owl-graph-tool
Collaborative Graph Tool Ontology
https://github.com/doriantaylor/owl-graph-tool
ontology
Last synced: 23 days ago
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Collaborative Graph Tool Ontology
- Host: GitHub
- URL: https://github.com/doriantaylor/owl-graph-tool
- Owner: doriantaylor
- License: apache-2.0
- Created: 2022-12-04T20:43:04.000Z (about 2 years ago)
- Default Branch: main
- Last Pushed: 2024-03-10T17:35:59.000Z (10 months ago)
- Last Synced: 2024-03-10T18:42:03.763Z (10 months ago)
- Topics: ontology
- Language: Makefile
- Homepage: https://vocab.methodandstructure.com/graph-tool#
- Size: 16.6 KB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
Author
Dorian
Taylor
Version
0.2
Created
December 4, 2022
Updated
January 21, 2023
December 12, 2023
October 6, 2024
Namespace URI
https://vocab.methodandstructure.com/graph-tool#
Preferred Namespace Prefix
`cgto`
Ontologies like [the IBIS
vocabulary](https://vocab.methodandstructure.com/ibis#) are intended to
only convey their essential semantic content. There are nevertheless
additional constructs, that do not belong in the core vocabulary, that
need to be expressed in order to fully operationalize the information it
describes as a piece of user-facing software. Such constructs include
the users of the environment, and the graphical representation of the
network itself, from colour palette to the relative (or absolute)
geometry of the individual nodes.
so what ingredients do we know we need?
- basic ACL for users (e.g. view-only, comment, write; users themselves
can be SIOC that connects to FOAF)
- something that describes colour palettes for
classes/properties/individuals (borrow selectors from SHACL)
- should be able to derive palettes from rules
- should be able to describe some kind of matrix for eg class/property
along one side (eg hue) and ui state (eg sat, lum) on the other
- should be able to delta the colour palette for subclasses etc
- some way to say how labels are constructed (can use loupe)
- essential coordinate data for visual layouts (eg sugiyama
rank/ordering)
- consider different view states (eg clustering, edge contraction)
With respect to the graph itself, the goal of this vocabulary is to
provide just the information that only needs to be computed when the
graph's content is changed, so the computations can be cached and used
as inputs to more than one view.
## Classes
This diagram shows the classes and properties defined in
this document using solid lines, and third-party classes and properties
using dashed lines.
### `Space`
A graph tool needs a shared logical space to lay out its universe of
discourse.
Subclass of:
sioc:Space
### `View`
A partially or fully computed geometric rendering of a (sub)graph, or
the structured information needed to do so.
### `Error`
An error is a type of `cgto:View` the tool can send the user when
something is wrong. It is more suitable to send as a response *body*
than `http:Response`, which would be problematically self-referential.
Subclass of:
cgto:View
### `Index`
An index relates a `cgto:Space` to a set of `cgto:Inventory` resources,
via a set of `cgto:Summary` resources.
Subclass of:
sioc:Container
### `Inventory`
An inventory is a de facto grouping of resources according to some
criterion.
Subclass of:
sioc:Container
## Properties
This diagram depicts the ontology from the point of view
of its properties.
### `focus`
The entity that takes primary focus in the space is what will be shown,
e.g. on the front page of a Web app.
Domain:
cgto:Space
Inverse of:
cgto:focus-of
Sub-property of:
sioc:space_of
### `focus-of`
The entity that takes primary focus in the space is what will be shown,
e.g. on the front page of a Web app.
Range:
cgto:Space
Inverse of:
cgto:focus
Sub-property of:
sioc:space_of
### `view`
Relates the space to a view of said space.
Domain:
cgto:Space
Range:
cgto:View
Sub-property of:
sioc:space_of
Inverse of:
cgto:view-of
### `view-of`
Relates a view back to its `cgto:Space`.
Domain:
cgto:View
Range:
cgto:Space
Sub-property of:
sioc:has_space
Inverse of:
cgto:view
### `index`
Connects the `cgto:Space` to its `cgto:Index` of resources.
Domain:
cgto:Space
Range:
cgto:Index
Sub-property of:
sioc:space_of
### `summary`
Connects the `cgto:Space` to its `cgto:Index` of resources.
Domain:
cgto:Index
Range:
cgto:Summary
Sub-property of:
sioc:parent_of
### `by-class`
Specifies the index of inventories organized by `rdfs:Class`.
Domain:
cgto:Index
Range:
cgto:Summary
Sub-property of:
cgto:summary
### `by-property`
Connects the `cgto:Space` to its `cgto:Index` of resources.
Domain:
cgto:Index
Range:
cgto:Summary
Sub-property of:
cgto:summary
## Inventory Summaries
We use the Data Cube Ontology to summarize and
enumerate the resource inventories.
### Data Structure Definitions
Data sets are described by data structure definitions which specify
different component properties.
#### `resources-by-class`
This structure describes a data set that tabulates subject resources of
a certain `rdf:type`.
Components:
cgto:class
#### `resources-by-property`
This structure describes a data set that tabulates both subject and
object resources by property (predicate).
Components:
cgto:property
### Dimension Properties
Dimension properties denote the axes along which the data set can be
partitioned.
#### `class`
Specifies the `owl:Class` found in the `rdf:type` of the subjects.
Domain:
qb:Observation
Range:
rdfs:Class
#### `property`
Specifies the property (predicate) in the statements from which subject
and object resources are enumerated.
Domain:
qb:Observation
Range:
rdf:Property
### Measure Properties
Measure properties record the experimental data, which in this case
amounts to counts of resources.
#### `asserted-subject-count`
Specifies the number of subject resources *asserted* to relate according
to the given criterion.
Domain:
qb:Observation
Range:
xsd:nonNegativeInteger
#### `inferred-subject-count`
Specifies the number of subject resources *inferred* to relate according
to the given criterion.
Domain:
qb:Observation
Range:
xsd:nonNegativeInteger
### Attribute Properties
Attribute properties are used to qualify the data. In this case they are
being appropriated to link to the actual inventories of resources.