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https://github.com/earmingol/cell2cell
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
https://github.com/earmingol/cell2cell
bioinformatics bulk-rna-seq cell-cell-communication cell-cell-interaction computational-biology machine-learning rna-seq rnaseq sc-rna-seq single-cell single-cell-rna-seq
Last synced: about 2 months ago
JSON representation
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
- Host: GitHub
- URL: https://github.com/earmingol/cell2cell
- Owner: earmingol
- License: bsd-3-clause
- Created: 2019-04-22T04:37:54.000Z (over 5 years ago)
- Default Branch: master
- Last Pushed: 2024-06-14T04:07:03.000Z (3 months ago)
- Last Synced: 2024-07-24T11:31:27.423Z (about 2 months ago)
- Topics: bioinformatics, bulk-rna-seq, cell-cell-communication, cell-cell-interaction, computational-biology, machine-learning, rna-seq, rnaseq, sc-rna-seq, single-cell, single-cell-rna-seq
- Language: Python
- Homepage:
- Size: 99.7 MB
- Stars: 55
- Watchers: 3
- Forks: 12
- Open Issues: 12
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Metadata Files:
- Readme: README.md
- License: LICENSE.txt
Awesome Lists containing this project
- awesome-cell-cell-communication - cell2cell - [python]- Tensor-cell2cell is an unsupervised method using tensor decomposition, which deciphers context-driven intercellular communication by simultaneously accounting for multiple stages, states, or locations of the cells. (Uncategorized / Uncategorized)