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https://github.com/ecohealthalliance/ohcleandat

One Health Data Cleaning and Quality Checking Package
https://github.com/ecohealthalliance/ohcleandat

Last synced: about 1 month ago
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One Health Data Cleaning and Quality Checking Package

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README

        

---
output: github_document
---

```{r, include = FALSE}
knitr::opts_chunk$set(
collapse = TRUE,
comment = "#>",
fig.path = "man/figures/README-",
out.width = "100%"
)
```

# ohcleandat

[![R-CMD-check](https://github.com/ecohealthalliance/ohcleandat/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/ecohealthalliance/ohcleandat/actions/workflows/R-CMD-check.yaml)

This package provides useful functions to orchestrate analytics and data cleaning pipelines for One Health projects.

## Installation

You can install the development version of ohcleandat from [GitHub](https://github.com/ecohealthalliance/ohcleandat) with:

``` r
# install.packages("devtools")
devtools::install_github("ecohealthalliance/ohcleandat")
```

## Getting Started

For help guides, check out the package vignettes.

## Contributions

This project uses the [Gitflow workflow](https://www.atlassian.com/git/tutorials/comparing-workflows/gitflow-workflow).

All new feature requests should be done in a new branch based on `dev` or a fork of `dev`. New branches can take the form `feature/*` or `fix/*`. Once the feature is complete, automated CI checks and merge checks will be performed and a pull request should be raised to merge changes into `dev`.

Once the package is nearing a release, a `release/x.x.x` branch should be created from the head of `dev`. This is used to make any changes to convert the code to production level and to increment the version number and make release notes if required before raising a PR into `main`. Once the PR into `main` is accepted, a github release should be performed, using the package version
as the tag.

A final step is deleting any feature and release branches and merging `main` back into `dev` and
incrementing the `dev` version to `x.x.x.9000`.

## Getting Help
If you encounter a clear bug, please file a minimal reproducible example on [github](https://github.com/ecohealthalliance/ohcleandat/issues).