https://github.com/efharkin/ez-ephys

Easy IO, inspection, and manipulation of electrophysiological data.
https://github.com/efharkin/ez-ephys

data-analysis electrophysiology neurophysiology neuroscience patch-clamp python

Last synced: 14 days ago
JSON representation

Easy IO, inspection, and manipulation of electrophysiological data.

• Host: GitHub
• URL: https://github.com/efharkin/ez-ephys
• Owner: efharkin
• License: mit
• Created: 2018-02-05T19:09:13.000Z (almost 8 years ago)
• Default Branch: master
• Last Pushed: 2022-03-30T17:47:22.000Z (almost 4 years ago)
• Last Synced: 2025-09-27T22:15:05.435Z (4 months ago)
• Topics: data-analysis, electrophysiology, neurophysiology, neuroscience, patch-clamp, python
• Language: Python
• Homepage:
• Size: 3.52 MB
• Stars: 4
• Watchers: 0
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.txt

Awesome Lists containing this project

README

          
[![Build Status](https://travis-ci.com/efharkin/ez-ephys.svg?branch=master)](https://travis-ci.com/efharkin/ez-ephys) [![PyPI version](https://badge.fury.io/py/ezephys.svg)](https://badge.fury.io/py/ezephys)

# ez-ephys

Easy IO, inspection, and manipulation of electrophysiological data in Python.

## Philosophy

Keep things simple so you can spend your time running experiments instead of

learning a complicated API.

## Highlights

- `rectools.Recording`: thin `np.ndarray` wrapper with a `plot` method for

  visualizing recordings

- `pltools.add_scalebar`: add a set of automatically-sized scalebars to a

  `matplotlib` plot

- `stimtools`: take your experiments beyond current steps with a simple system

  for generating complicated electrophysiological stimuli ([examples](https://github.com/efharkin/ez-ephys/blob/master/examples/stimtools_demo.ipynb))

## Installation

`pip install ezephys`