https://github.com/emodnet/emodnetbiologymaps
https://github.com/emodnet/emodnetbiologymaps
biology dataproducts
Last synced: 12 months ago
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- Host: GitHub
- URL: https://github.com/emodnet/emodnetbiologymaps
- Owner: EMODnet
- License: other
- Created: 2020-10-01T14:40:28.000Z (over 5 years ago)
- Default Branch: master
- Last Pushed: 2021-08-12T11:33:15.000Z (almost 5 years ago)
- Last Synced: 2023-05-19T18:28:06.760Z (about 3 years ago)
- Topics: biology, dataproducts
- Language: R
- Homepage:
- Size: 1.87 MB
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
- License: LICENSE
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README
# EMODnetBiologyMaps
[](https://github.com/EMODnet/EMODnetBiologyMaps/actions)
The goal of EMODnetBiologyMaps is to create ggplot2 maps of using the EMODnet style:
* Colors follow the EMODnet guidelines
* The default projection is [EPGS:3035](https://epsg.io/3035): ETRS89-extended / LAEA Europe
* When the map is saved as .png, the EMODnet logo is pasted in the final map.
## Installation
You can install the development version of EMODnetBiologyMaps with:
``` r
devtools::install_github("EMODnet/EMODnetBiologyMaps")
```
## Example
1. Export a gridded abundance map of anchovies ([*Engraulis encrasicolus*](https://www.marinespecies.org/aphia.php?p=taxdetails&id=126426)):
``` r
# devtools::install_github("lifewatch/eurobis")
library(EMODnetBiologyMaps)
library(eurobis)
# Retrieve grid data for "Eriocheir sinensis" (AphiaID = 126426) using the eurobis package
points <- getEurobisGrid(aphiaid = 126426, gridsize = '1d')
# Render ggplot2 map
map <- emodnet_map_plot(points, fill = points$RecordCount, title = "Engraulis encrasicolus", subtitle = "AphiaID 126426", legend = "Abundance", zoom = FALSE, option = "viridis")
# Save with EMODnet logo
emodnet_map_logo(map, path = "./data-raw/map1.png", width = 198, height = 121, dpi = 300, units = "mm", gravity = "northeast", offset = "+650+200", color = TRUE)
```
