https://github.com/etetoolkit/ete-gallery
Examples of use of the ETE Toolkit
https://github.com/etetoolkit/ete-gallery
Last synced: 8 months ago
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Examples of use of the ETE Toolkit
- Host: GitHub
- URL: https://github.com/etetoolkit/ete-gallery
- Owner: etetoolkit
- Created: 2025-01-29T09:40:44.000Z (over 1 year ago)
- Default Branch: main
- Last Pushed: 2025-03-28T09:43:51.000Z (about 1 year ago)
- Last Synced: 2025-04-10T22:58:01.639Z (about 1 year ago)
- Language: Python
- Size: 68.4 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: readme.md
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README
# ETE Gallery
A demonstration of some of the graphical capabilities of
[ETE](https://github.com/etetoolkit/ete).
## 📖 Tutorial
The files in `tutorial` introduce in a gentle way how to draw and
explore trees with ETE.
1. Simple visualization
2. Two trees in the same session
3. Layout with a tree style
4. Layout using the `draw_node()` function
5. Layout with a `draw_node()` that generates faces
6. Layout with a `draw_node()` that generates styles (dicts) and faces
7. Use of `draw_node(node, collapsed)` and `is_leaf_fn()`
8. Tree style and node style with many options
9. Tree style and node style with many options, as arguments to `explore()`
## 💡 Examples
The files in `examples` show the use of different representation
elements (mostly faces).
## 👩🎓 Course material
The files in `course` contain interactive jupyter notebooks that we
have used as course material during ETE workshops.
## 📚 Documentation
The documentation about how to use the visualization capabilities of
ETE can be found at:
- General ETE documentation -
https://etetoolkit.github.io/ete/index.html
- Tree drawing and exploration tutorial -
https://etetoolkit.github.io/ete/tutorial/tutorial_smartview.html
- Smartview reference -
https://etetoolkit.github.io/ete/reference/reference_smartview.html