https://github.com/eulerlab/scanm_support
Two-photon imaging software - Support
https://github.com/eulerlab/scanm_support
Last synced: about 1 month ago
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Two-photon imaging software - Support
- Host: GitHub
- URL: https://github.com/eulerlab/scanm_support
- Owner: eulerlab
- Created: 2019-09-06T07:41:47.000Z (almost 7 years ago)
- Default Branch: master
- Last Pushed: 2024-05-14T11:19:45.000Z (about 2 years ago)
- Last Synced: 2025-10-22T12:49:09.996Z (8 months ago)
- Language: Jupyter Notebook
- Size: 29.4 MB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 1
-
Metadata Files:
- Readme: README.md
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README
# ScanM - Support
Python support for [ScanM](https://github.com/eulerlab/ScanM_support/wiki), a two-photon imaging software. This package provides tools for reading and processing ScanM binary data files (`.smp` pixel data, `.smh` header files).
## Installation
### Prerequisites
- Python >= 3.6
- [uv](https://docs.astral.sh/uv/getting-started/installation/) (recommended) or pip
### Clone and install
```bash
git clone https://github.com/eulerlab/ScanM_support.git
cd ScanM_support
```
**With uv (recommended):**
```bash
uv pip install -e .
```
**With pip:**
```bash
pip install -e .
```
## Usage
```python
from scanmsupport.scanm.scanm_smp import SMP
data = SMP()
data.loadSMP("path/to/file.smp")
```
## Further information
Check out the [wiki](https://github.com/eulerlab/ScanM_support/wiki).