https://github.com/ewels/nf-core-arm-discovery
https://github.com/ewels/nf-core-arm-discovery
Last synced: 20 days ago
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- Host: GitHub
- URL: https://github.com/ewels/nf-core-arm-discovery
- Owner: ewels
- Created: 2024-12-06T21:30:51.000Z (6 months ago)
- Default Branch: main
- Last Pushed: 2025-04-30T10:37:41.000Z (about 1 month ago)
- Last Synced: 2025-05-11T06:38:53.193Z (20 days ago)
- Language: Python
- Size: 457 KB
- Stars: 0
- Watchers: 2
- Forks: 1
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
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README
# arm64 builds for nf-core pipelines
Conda packages found from source code and independently built using Wave, without a version number.
Checks are only for build success, not for functionality.
> [!NOTE]
> Table last updated 2025-04-30
| Pipeline | Success % | Succeeded | Failed |
| ------------------------- | --------- | --------- | ------ |
| rnaseq | 100.0% | 52 | 0 |
| sarek | 100.0% | 41 | 0 |
| mag | 88.9% | 40 | 5 |
| scrnaseq | 100.0% | 20 | 0 |
| chipseq | 100.0% | 25 | 0 |
| atacseq | 100.0% | 23 | 0 |
| ampliseq | 100.0% | 16 | 0 |
| nanoseq | 100.0% | 20 | 0 |
| fetchngs | 100.0% | 9 | 0 |
| eager | 95.6% | 43 | 2 |
| rnafusion | 89.2% | 33 | 4 |
| methylseq | 100.0% | 19 | 0 |
| taxprofiler | 100.0% | 38 | 0 |
| viralrecon | 97.5% | 39 | 1 |
| hic | 100.0% | 26 | 0 |
| raredisease | 96.2% | 51 | 2 |
| cutandrun | 100.0% | 26 | 0 |
| pangenome | 70.0% | 7 | 3 |
| smrnaseq | 100.0% | 35 | 0 |
| funcscan | 78.8% | 26 | 7 |
| differentialabundance | 96.3% | 26 | 1 |
| hlatyping | 100.0% | 13 | 0 |
| bacass | 80.6% | 25 | 6 |
| proteinfold | 100.0% | 12 | 0 |
| airrflow | 85.7% | 6 | 1 |
| oncoanalyser | 100.0% | 30 | 0 |
| bactmap | 97.1% | 33 | 1 |
| spatialvi | 100.0% | 14 | 0 |
| rnasplice | 100.0% | 18 | 0 |
| demultiplex | 100.0% | 18 | 0 |
| circrna | 96.3% | 52 | 2 |
| scdownstream | 100.0% | 41 | 0 |
| epitopeprediction | 85.7% | 18 | 3 |
| rnavar | 96.0% | 24 | 1 |
| crisprseq | 94.7% | 18 | 1 |
| proteomicslfq | 94.7% | 18 | 1 |
| mhcquant | 77.8% | 7 | 2 |
| lncpipe | 100.0% | 33 | 0 |
| isoseq | 82.4% | 14 | 3 |
| circdna | 100.0% | 12 | 0 |
| readsimulator | 100.0% | 14 | 0 |
| imcyto | 100.0% | 1 | 0 |
| hgtseq | 100.0% | 16 | 0 |
| multiplesequencealign | 100.0% | 24 | 0 |
| metatdenovo | 94.1% | 32 | 2 |
| gwas | 100.0% | 6 | 0 |
| deepmodeloptim | 100.0% | 5 | 0 |
| genomeannotator | 100.0% | 3 | 0 |
| bamtofastq | 100.0% | 5 | 0 |
| scnanoseq | 94.1% | 16 | 1 |
| clipseq | 90.9% | 20 | 2 |
| fastquorum | 100.0% | 6 | 0 |
| dualrnaseq | 100.0% | 11 | 0 |
| nascent | 97.6% | 41 | 1 |
| phaseimpute | 90.5% | 19 | 2 |
| viralintegration | 100.0% | 6 | 0 |
| metaboigniter | 100.0% | 2 | 0 |
| genomeassembler | 86.1% | 31 | 5 |
| diaproteomics | 91.7% | 33 | 3 |
| pathogensurveillance | 88.6% | 39 | 5 |
| detaxizer | 100.0% | 8 | 0 |
| variantbenchmarking | 77.8% | 21 | 6 |
| nanostring | 100.0% | 19 | 0 |
| riboseq | 100.0% | 33 | 0 |
| metapep | 100.0% | 3 | 0 |
| cageseq | 100.0% | 13 | 0 |
| phageannotator | 74.1% | 20 | 7 |
| omicsgenetraitassociation | 100.0% | 6 | 0 |
| molkart | 66.7% | 4 | 2 |
| mnaseseq | 95.0% | 19 | 1 |
| denovotranscript | 84.6% | 11 | 2 |
| tfactivity | 70.0% | 14 | 6 |
| reportho | 100.0% | 5 | 0 |
| coproid | 92.6% | 25 | 2 |
| variantcatalogue | 92.9% | 13 | 1 |
| pixelator | 85.7% | 6 | 1 |
| mcmicro | 50.0% | 1 | 1 |
| datasync | 100.0% | 1 | 0 |
| createpanelrefs | 100.0% | 5 | 0 |
| tbanalyzer | 94.1% | 16 | 1 |
| slamseq | 100.0% | 11 | 0 |
| seqinspector | 100.0% | 7 | 0 |
| phyloplace | 100.0% | 14 | 0 |
| hicar | 100.0% | 24 | 0 |
| createtaxdb | 100.0% | 22 | 0 |
| radseq | 100.0% | 18 | 0 |
| pairgenomealign | 100.0% | 6 | 0 |
| meerpipe | 100.0% | 2 | 0 |
| marsseq | 95.5% | 21 | 1 |
| rnadnavar | 92.5% | 37 | 3 |
| rangeland | 100.0% | 4 | 0 |
| pgdb | 100.0% | 9 | 0 |
| genomeqc | 87.5% | 14 | 2 |
| callingcards | 100.0% | 21 | 0 |
| methylarray | 85.2% | 23 | 4 |
| magmap | 100.0% | 19 | 0 |
| genomeskim | 100.0% | 2 | 0 |
| demo | 100.0% | 3 | 0 |
| troughgraph | 100.0% | 2 | 0 |
| sammyseq | 100.0% | 23 | 0 |
| fastqrepair | 100.0% | 5 | 0 |