https://github.com/fbergmann/pyodide-copasi
Vue3 Project using Pyodide / basico and python-copasi emscripten
https://github.com/fbergmann/pyodide-copasi
copasi primevue sbml sbml-simulation vue3
Last synced: 8 days ago
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Vue3 Project using Pyodide / basico and python-copasi emscripten
- Host: GitHub
- URL: https://github.com/fbergmann/pyodide-copasi
- Owner: fbergmann
- License: bsd-2-clause
- Created: 2024-03-13T14:48:34.000Z (almost 2 years ago)
- Default Branch: master
- Last Pushed: 2024-06-21T13:23:08.000Z (over 1 year ago)
- Last Synced: 2024-06-22T05:55:36.119Z (over 1 year ago)
- Topics: copasi, primevue, sbml, sbml-simulation, vue3
- Language: CSS
- Homepage: https://fbergmann.github.io/pyodide-copasi
- Size: 3.65 MB
- Stars: 0
- Watchers: 1
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE
Awesome Lists containing this project
README
# pyodide-copasi
This basic website demonstrates using COPASI with Pyodide and Vue3.
It uses the [sakai template](sakai.primevue.org/#/documentation). For the basic
setup you'd use:
```bash
git clone https://github.com/fbergmann/pyodide-copasi
cd pyodide-copasi
npm i
```
The special version of pyodide (that includes COPASI + basico) can be downloaded from the
release page. It has to be extracted as `./public/pyodide`. So assuming you are in the
project directory:
```bash
cd public
wget https://github.com/fbergmann/pyodide-copasi/releases/download/v0.0.1/pyodide.zip
unzip pyodide.zip
rm pyodide.zip
cd ..
```
If you want to debug the page you run:
```bash
npm run dev
```
to build the static HTML + javascript page you'd run:
```bash
npm run build
```
This creates the `pyodide-copasi` directory with the latest version. This is the version deployed at:
To serve it locally you can just run:
```bash
wget https://github.com/fbergmann/pyodide-copasi/releases/download/v0.0.1/pyodide-copasi.zip
unzip pyodide-copasi.zip
rm pyodide-copasi.zip
python3 -m http.server
```
and access the page at .
## Download the pre-built version
You could also just download the latest `pyodide-copasi.zip` file extract it and have it served as installation:
```bash
python3 -m http.server
```
I leave the automatically generated documentation from the template below:
## Recommended IDE Setup
[VSCode](https://code.visualstudio.com/) + [Volar](https://marketplace.visualstudio.com/items?itemName=Vue.volar) (and disable Vetur) + [TypeScript Vue Plugin (Volar)](https://marketplace.visualstudio.com/items?itemName=Vue.vscode-typescript-vue-plugin).
## Type Support for `.vue` Imports in TS
TypeScript cannot handle type information for `.vue` imports by default, so we replace the `tsc` CLI with `vue-tsc` for type checking. In editors, we need [TypeScript Vue Plugin (Volar)](https://marketplace.visualstudio.com/items?itemName=Vue.vscode-typescript-vue-plugin) to make the TypeScript language service aware of `.vue` types.
If the standalone TypeScript plugin doesn't feel fast enough to you, Volar has also implemented a [Take Over Mode](https://github.com/johnsoncodehk/volar/discussions/471#discussioncomment-1361669) that is more performant. You can enable it by the following steps:
1. Disable the built-in TypeScript Extension
1) Run `Extensions: Show Built-in Extensions` from VSCode's command palette
2) Find `TypeScript and JavaScript Language Features`, right click and select `Disable (Workspace)`
2. Reload the VSCode window by running `Developer: Reload Window` from the command palette.
## Customize configuration
See [Vite Configuration Reference](https://vitejs.dev/config/).
## Project Setup
```sh
npm install
```
### Compile and Hot-Reload for Development
```sh
npm run dev
```
### Type-Check, Compile and Minify for Production
```sh
npm run build
```
### Run Unit Tests with [Vitest](https://vitest.dev/)
```sh
npm run test:unit
```
### Run End-to-End Tests with [Playwright](https://playwright.dev)
```sh
# Install browsers for the first run
npx playwright install
# When testing on CI, must build the project first
npm run build
# Runs the end-to-end tests
npm run test:e2e
# Runs the tests only on Chromium
npm run test:e2e -- --project=chromium
# Runs the tests of a specific file
npm run test:e2e -- tests/example.spec.ts
# Runs the tests in debug mode
npm run test:e2e -- --debug
```
### Lint with [ESLint](https://eslint.org/)
```sh
npm run lint
```