https://github.com/fhdsl/fh_cluster_101

This course introduces users to the Fred Hutch Cluster. It will lead users through account creation, using the terminal, connecting to the cluster, submitting jobs, and transferring files. Available in both web and Leanpub formats.
https://github.com/fhdsl/fh_cluster_101

command-line computing-cluster course hpcc hutch-course

Last synced: 3 days ago
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This course introduces users to the Fred Hutch Cluster. It will lead users through account creation, using the terminal, connecting to the cluster, submitting jobs, and transferring files. Available in both web and Leanpub formats.

• Host: GitHub
• URL: https://github.com/fhdsl/fh_cluster_101
• Owner: fhdsl
• License: cc-by-4.0
• Created: 2022-08-19T19:20:10.000Z (about 2 years ago)
• Default Branch: main
• Last Pushed: 2024-11-08T18:10:45.000Z (10 days ago)
• Last Synced: 2024-11-08T18:28:57.514Z (10 days ago)
• Topics: command-line, computing-cluster, course, hpcc, hutch-course
• Language: JavaScript
• Homepage: https://hutchdatascience.org/FH_Cluster_101/
• Size: 110 MB
• Stars: 0
• Watchers: 3
• Forks: 2
• Open Issues: 11
• Metadata Files:
  • Readme: README.md
  • License: LICENSE.md
  • Code of conduct: code_of_conduct.md

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README

        
# Fred Hutch Cluster 101 Course

[![Render Bookdown and Coursera](https://github.com/jhudsl/OTTR_Template/actions/workflows/render-all.yml/badge.svg)](https://github.com/jhudsl/OTTR_Template/actions/workflows/render-all.yml)

![Fred Hutch Cluster 101 journey](https://raw.githubusercontent.com/fhdsl/FH_Cluster_101/main/assets/title_image.jpg)

This course was created from [this GitHub template](https://github.com/jhudsl/OTTR_Template).

You can see the rendered course material here: 

- As a Bookdown course: https://hutchdatascience.org/FH_Cluster_101/

- As a Leanpub course: https://leanpub.com/courses/fredhutch/fredhutchcluster101

If you would like to contribute to this course material, please [submit an issue on this repo](https://github.com/fhdsl/FH_Cluster_101/issues/new) or visit the [OTTR Project website](https://www.ottrproject.org/index.html).

## About this course

This course introduces users to the Fred Hutch Cluster.

Our goal for this course is to get users running on the Fred Hutch cluster **quickly and efficiently**. It is intended for all Fred Hutch cluster users whether they are completely new to using a cluster, or if they have used a cluster at another institution but are new to Fred Hutch. 

## Learning Objectives

This course will teach learners to:

- Get their cluster account set up at Fred Hutch

- Set up their Terminal and log in

- Run their first job on the cluster

- Transfer a basic file back and forth to the cluster

- Run an interactive session on the cluster

- Follow best practices for basic cluster use

## Encountering problems?

If you are encountering any problems with this course, please file a GitHub issue.


All materials in this course are licensed under a Creative Commons Attribution 4.0 International License unless noted otherwise.