https://github.com/fjossinet/rna-js

Produce and Analyse RNA Data with Node.js
https://github.com/fjossinet/rna-js

Last synced: 14 days ago
JSON representation

Produce and Analyse RNA Data with Node.js

• Host: GitHub
• URL: https://github.com/fjossinet/rna-js
• Owner: fjossinet
• License: mit
• Created: 2015-03-05T19:27:20.000Z (almost 10 years ago)
• Default Branch: master
• Last Pushed: 2015-03-05T19:51:19.000Z (almost 10 years ago)
• Last Synced: 2024-11-06T12:19:24.921Z (2 months ago)
• Language: JavaScript
• Size: 156 KB
• Stars: 2
• Watchers: 3
• Forks: 1
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
rna-js -- Produce and Analyse RNA Data with Node.js

===================================================

To use rna-js in your node.js project, do the following:

	var rna = require('rna-js/lib/rna.js');

	var parser = new rna.parsers.StringParser();

	parser.on('end', function(tertiaryStructures) {

		//...

	});

	parser.parsePDB(myPDBdata);

* ./core/molecules.js: RNA and DNA concepts,

* ./core/features.js: RNA 2D and 3D concepts,

* ./core/utils.js: some utils functions,

* ./io/computations.js: wrappers for algorithms (Blast, RNAfold,...),

* ./io/db.js: wrappers for databases (RFAM, NCBI,...),

* ./io/parsers.js: parsers for bioinformatics format (PDB, FASTA,...).