https://github.com/flatironinstitute/CaImAn

Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
https://github.com/flatironinstitute/CaImAn

2-photon calcium-imaging cnmf deconvolution motion-correction source-extraction

Last synced: 3 months ago
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Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

• Host: GitHub
• URL: https://github.com/flatironinstitute/CaImAn
• Owner: flatironinstitute
• License: gpl-2.0
• Created: 2015-08-06T13:58:45.000Z (over 9 years ago)
• Default Branch: main
• Last Pushed: 2024-07-25T20:16:12.000Z (4 months ago)
• Last Synced: 2024-07-26T22:00:08.871Z (3 months ago)
• Topics: 2-photon, calcium-imaging, cnmf, deconvolution, motion-correction, source-extraction
• Language: Python
• Homepage: https://caiman.readthedocs.io
• Size: 564 MB
• Stars: 614
• Watchers: 46
• Forks: 362
• Open Issues: 63
• Metadata Files:
  • Readme: README.md
  • Changelog: CHANGELOG.txt
  • Contributing: CONTRIBUTING.md
  • License: LICENSE.txt
  • Code of conduct: docs/CODE_OF_CONDUCT.md

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