https://github.com/flatironinstitute/caiman
Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
https://github.com/flatironinstitute/caiman
2-photon calcium-imaging cnmf deconvolution motion-correction source-extraction
Last synced: 10 months ago
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Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.
- Host: GitHub
- URL: https://github.com/flatironinstitute/caiman
- Owner: flatironinstitute
- License: gpl-2.0
- Created: 2015-08-06T13:58:45.000Z (over 10 years ago)
- Default Branch: main
- Last Pushed: 2025-04-09T19:25:53.000Z (12 months ago)
- Last Synced: 2025-04-13T15:04:39.865Z (11 months ago)
- Topics: 2-photon, calcium-imaging, cnmf, deconvolution, motion-correction, source-extraction
- Language: Python
- Homepage: https://caiman.readthedocs.io
- Size: 571 MB
- Stars: 654
- Watchers: 44
- Forks: 377
- Open Issues: 99
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Metadata Files:
- Readme: README.md
- Changelog: CHANGELOG.txt
- Contributing: CONTRIBUTING.md
- License: LICENSE.txt
- Code of conduct: docs/CODE_OF_CONDUCT.md