https://github.com/fomightez/bioinformatics_software_compatibility
Details of compatibility of software commonly used in tandem
https://github.com/fomightez/bioinformatics_software_compatibility
bioinformatics bioinformatics-pipeline
Last synced: 3 months ago
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Details of compatibility of software commonly used in tandem
- Host: GitHub
- URL: https://github.com/fomightez/bioinformatics_software_compatibility
- Owner: fomightez
- Created: 2017-03-02T20:50:32.000Z (over 8 years ago)
- Default Branch: master
- Last Pushed: 2017-03-08T17:07:29.000Z (about 8 years ago)
- Last Synced: 2024-12-28T13:26:02.638Z (5 months ago)
- Topics: bioinformatics, bioinformatics-pipeline
- Language: Python
- Size: 2.93 KB
- Stars: 0
- Watchers: 2
- Forks: 0
- Open Issues: 0
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Metadata Files:
- Readme: README.md
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README
Bioinformatics Software Compatibility
=====================================
Certain bioinformatics software is commonly used in tandem. Often certain versions are needed of each to be compatible in a pipeline or workflow. Knowing the details can make installations and Docker builds much easier.
Software
--------
* [TopHat2 and Bowtie compatibility](http://tophat2-and-bowtie-compatibility.readthedocs.io/en/latest/)
* [Bioconductor and R compatibility](http://r-and-bioconductor-compatibility.readthedocs.io/en/latest/)