https://github.com/fomightez/genomeview-binder

Attempt to binderize https://github.com/nspies/genomeview, An extensible python-based genomics visualization engine
https://github.com/fomightez/genomeview-binder

Last synced: 4 months ago
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Attempt to binderize https://github.com/nspies/genomeview, An extensible python-based genomics visualization engine

• Host: GitHub
• URL: https://github.com/fomightez/genomeview-binder
• Owner: fomightez
• License: mit
• Created: 2019-08-01T17:24:26.000Z (almost 6 years ago)
• Default Branch: master
• Last Pushed: 2019-08-01T17:59:10.000Z (almost 6 years ago)
• Last Synced: 2024-12-28T13:25:40.032Z (6 months ago)
• Language: Python
• Size: 4.35 MB
• Stars: 0
• Watchers: 2
• Forks: 0
• Open Issues: 0
• Metadata Files:
  • Readme: README.md
  • License: LICENSE

Awesome Lists containing this project

README

        
Attempting to binderize [this repository](https://github.com/nspies/genomeview)....

(NOTE: Presently the first nine cells of the example notebook **work**. The remaining fail because they try to use FTP to access some files and MyBinder blocks that. I should be able to update `data` folder to perhaps address that.)

[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/fomightez/genomeview-binder/master?urlpath=lab/tree/examples%2Fexamples.ipynb)

## genomeview - a python module for visualizing genomic data by nspies

![genomeview example image](https://raw.githubusercontent.com/nspies/genomeview/master/docs/images/overview.svg?sanitize=true)

Example [jupyter notebook](http://nbviewer.jupyter.org/github/nspies/genomeview/blob/master/examples/examples.ipynb) with visualizations inline.

See the [documentation on read-the-docs](http://genomeview.readthedocs.io/en/latest/index.html) for installation and usage

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[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/fomightez/genomeview-binder/master?urlpath=lab/tree/examples%2Fexamples.ipynb)