https://github.com/frbcesab/eumammals
:basket: Range of European Mammals Species
https://github.com/frbcesab/eumammals
europe mammals range-maps traits
Last synced: 3 months ago
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:basket: Range of European Mammals Species
- Host: GitHub
- URL: https://github.com/frbcesab/eumammals
- Owner: FRBCesab
- License: gpl-2.0
- Created: 2021-11-02T10:29:18.000Z (over 3 years ago)
- Default Branch: main
- Last Pushed: 2023-06-27T14:30:28.000Z (almost 2 years ago)
- Last Synced: 2025-01-29T18:14:35.771Z (5 months ago)
- Topics: europe, mammals, range-maps, traits
- Language: R
- Homepage:
- Size: 781 KB
- Stars: 1
- Watchers: 2
- Forks: 0
- Open Issues: 0
-
Metadata Files:
- Readme: README.md
- License: LICENSE.md
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README
# eumammals
Research compendium to create reproducible examples for the R package
[`funbiogeo`](https://github.com/frbcesab/funbiogeo). These datasets are derived
from IUCN mammals range maps (raw data available [here](https://www.iucnredlist.org/resources/spatial-data-download))
and the traits database PanTHERIA (database available [here](https://figshare.com/collections/PanTHERIA_a_species-level_database_of_life_history_ecology_and_geography_of_extant_and_recently_extinct_mammals/3301274) and
metadata available [here](https://esapubs.org/archive/ecol/E090/184/metadata.htm)).
### Content
This repository is structured as follow:
- :file_folder: [data/](https://github.com/frbcesab/eumammals/tree/main/data): contains raw data to create datasets (except for IUCN range maps).
- :file_folder: [analyses/](https://github.com/frbcesab/eumammals/tree/main/analyses): contains the R script `prepare-data.R` to create datasets
- :file_folder: [outputs/](https://github.com/frbcesab/eumammals/tree/main/outputs): contains all the datasets that we will be used as examples in the project [`funbiogeo`](https://github.com/frbcesab/funbiogeo)
- :page_facing_up: [DESCRIPTION](https://github.com/frbcesab/eumammals/tree/main/DESCRIPTION): contains project metadata (author, date, dependencies, etc.)
- :page_facing_up: [renv.lock](https://github.com/frbcesab/eumammals/tree/main/renv.lock): contains recipe to locally install required packages (and their versions)
### Usage
Clone the repository and run this command in R/RStudio:
``` r
source(here::here("analyses/prepare-data.R"))
```
Note that all required packages, listed in the `DESCRIPTION` and `renv.lock` files, will be installed.