https://github.com/freestatman/ideogRam

R htmlwidget package for ideogram.js
https://github.com/freestatman/ideogRam

Last synced: about 2 months ago
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R htmlwidget package for ideogram.js

• Host: GitHub
• URL: https://github.com/freestatman/ideogRam
• Owner: freestatman
• Created: 2017-09-09T13:49:23.000Z (about 7 years ago)
• Default Branch: develop
• Last Pushed: 2022-10-26T03:19:37.000Z (almost 2 years ago)
• Last Synced: 2024-05-14T12:34:34.522Z (4 months ago)
• Language: R
• Homepage: https://freestatman.github.io/ideogRam/
• Size: 4.14 MB
• Stars: 16
• Watchers: 6
• Forks: 4
• Open Issues: 7
• Metadata Files:
  • Readme: README.md

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• awesome-shiny-extensions - ideogRam - HTML widget for chromosome visualization with ideogram.js. (Visualization / Biological Data)

README

        

[![R-CMD-check](https://github.com/freestatman/ideogRam/workflows/R-CMD-check/badge.svg)](https://github.com/freestatman/ideogRam/actions)

# ideogRam R htmlwidget package

ideogRam is an R htmlwidget wrapper package for Eric Weitz's ideogram.js [https://github.com/eweitz/ideogram].

This package is written for the [R project in GSoC 2018](https://summerofcode.withgoogle.com/projects/#6554027051974656).

## Install

```r

devtools::install_github("freestatman/ideogRam")

```

## Example

See [vignettes](https://freestatman.github.io/ideogRam/articles/example1.html) for some basic examples.

ideogRam also works in shiny applications:

```r

example("renderIdeogRam")

example("ideogRamOutput")

```

## Acknowledgement

Huge thanks to my mentors **Eric Weitz, Jialin Ma** and **Freeman Wang** who helps me understand the nature of this project.