https://github.com/gagniuc/a-high-discrimination-motif-scanner-and-variable-sensitivity
This is a high discrimination scanner designed to recognise DNA motifs within a long stretch of DNA. Most importantly, this implementation shows how to implement a variable sensitivity for detection, by modifying the pseudocount values.
https://github.com/gagniuc/a-high-discrimination-motif-scanner-and-variable-sensitivity
discrimination dna javascript js matrix motif pattern position-weight-matrix pwm rna scanner
Last synced: 7 months ago
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This is a high discrimination scanner designed to recognise DNA motifs within a long stretch of DNA. Most importantly, this implementation shows how to implement a variable sensitivity for detection, by modifying the pseudocount values.
- Host: GitHub
- URL: https://github.com/gagniuc/a-high-discrimination-motif-scanner-and-variable-sensitivity
- Owner: Gagniuc
- License: mit
- Created: 2021-08-12T13:26:46.000Z (about 4 years ago)
- Default Branch: main
- Last Pushed: 2022-03-21T11:02:42.000Z (over 3 years ago)
- Last Synced: 2025-01-20T11:20:13.328Z (9 months ago)
- Topics: discrimination, dna, javascript, js, matrix, motif, pattern, position-weight-matrix, pwm, rna, scanner
- Language: HTML
- Homepage:
- Size: 137 KB
- Stars: 4
- Watchers: 1
- Forks: 0
- Open Issues: 0